WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      237       95.56      -   324     1.37     25.74

   Group 1       61       92.42      -    90     1.48     31.15
   Group 2       53       94.64      -    75     1.42     32.08
   Group 3       59       96.72      -    85     1.44     27.12
   Group 4       64       98.46      -    74     1.16     14.06

   Partial      247       99.60      -   371     1.50     31.98

   Group 1       65       98.48      -    99     1.52     32.31
   Group 2       56      100.00      -    91     1.62     42.86
   Group 3       61      100.00      -    97     1.59     36.07
   Group 4       65      100.00      -    84     1.29     18.46

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0018
KOG1145
KOG1299
KOG1358
KOG1523
KOG1532
KOG1556
KOG1723
KOG1795
KOG1816
KOG3222

# Category: Partial 
KOG1816