WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      236       95.16      -   370     1.57     37.71

   Group 1       59       89.39      -    86     1.46     30.51
   Group 2       53       94.64      -    90     1.70     43.40
   Group 3       61      100.00      -    97     1.59     37.70
   Group 4       63       96.92      -    97     1.54     39.68

   Partial      246       99.19      -   451     1.83     47.97

   Group 1       65       98.48      -   114     1.75     41.54
   Group 2       56      100.00      -   107     1.91     51.79
   Group 3       61      100.00      -   111     1.82     49.18
   Group 4       64       98.46      -   119     1.86     50.00

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0302
KOG0469
KOG1185
KOG1211
KOG1241
KOG1358
KOG1466
KOG1468
KOG1770
KOG2004
KOG2807
KOG3013

# Category: Partial 
KOG0469
KOG1241