WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      222       89.52      -   276     1.24     21.17

   Group 1       59       89.39      -    71     1.20     20.34
   Group 2       49       87.50      -    61     1.24     22.45
   Group 3       55       90.16      -    72     1.31     25.45
   Group 4       59       90.77      -    72     1.22     16.95

   Partial      244       98.39      -   346     1.42     35.66

   Group 1       64       96.97      -    86     1.34     31.25
   Group 2       56      100.00      -    85     1.52     44.64
   Group 3       61      100.00      -    88     1.44     39.34
   Group 4       63       96.92      -    87     1.38     28.57

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0018
KOG0209
KOG0291
KOG0434
KOG0469
KOG0556
KOG0948
KOG0969
KOG1137
KOG1272
KOG1358
KOG1540
KOG1795
KOG1872
KOG2004
KOG2036
KOG2044
KOG2446
KOG2451
KOG2537
KOG2781
KOG2851
KOG2874
KOG2971
KOG3497
KOG3499

# Category: Partial 
KOG0469
KOG1272
KOG1872
KOG2446