WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      229       92.34      -   305     1.33     27.07

   Group 1       58       87.88      -    78     1.34     29.31
   Group 2       53       94.64      -    69     1.30     22.64
   Group 3       54       88.52      -    73     1.35     25.93
   Group 4       64       98.46      -    85     1.33     29.69

   Partial      245       98.79      -   352     1.44     35.10

   Group 1       64       96.97      -    91     1.42     35.94
   Group 2       55       98.21      -    78     1.42     30.91
   Group 3       61      100.00      -    91     1.49     37.70
   Group 4       65      100.00      -    92     1.42     35.38

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0018
KOG0261
KOG0376
KOG0861
KOG0948
KOG0964
KOG0969
KOG1137
KOG1241
KOG1355
KOG1358
KOG1795
KOG2036
KOG2519
KOG2531
KOG2606
KOG2719
KOG2825
KOG2851

# Category: Partial 
KOG0376
KOG2531
KOG2606