WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      238       95.97      -   284     1.19     14.71

   Group 1       62       93.94      -    70     1.13      8.06
   Group 2       54       96.43      -    66     1.22     16.67
   Group 3       59       96.72      -    68     1.15     15.25
   Group 4       63       96.92      -    80     1.27     19.05

   Partial      243       97.98      -   313     1.29     20.58

   Group 1       64       96.97      -    77     1.20     12.50
   Group 2       55       98.21      -    75     1.36     25.45
   Group 3       60       98.36      -    76     1.27     21.67
   Group 4       64       98.46      -    85     1.33     23.44

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0276
KOG0376
KOG0780
KOG1185
KOG1335
KOG1358
KOG1889
KOG2874
KOG3285
KOG3855

# Category: Partial 
KOG0276
KOG0376
KOG1185
KOG1889
KOG2874