WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      217       87.50      -   235     1.08      7.83

   Group 1       52       78.79      -    55     1.06      5.77
   Group 2       48       85.71      -    52     1.08      8.33
   Group 3       55       90.16      -    61     1.11      9.09
   Group 4       62       95.38      -    67     1.08      8.06

   Partial      237       95.56      -   278     1.17     14.77

   Group 1       63       95.45      -    72     1.14     12.70
   Group 2       53       94.64      -    63     1.19     16.98
   Group 3       58       95.08      -    72     1.24     18.97
   Group 4       63       96.92      -    71     1.13     11.11

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0018
KOG0188
KOG0271
KOG0346
KOG0366
KOG0376
KOG0434
KOG0927
KOG0964
KOG1058
KOG1159
KOG1185
KOG1241
KOG1272
KOG1358
KOG1374
KOG1532
KOG1534
KOG1535
KOG1540
KOG1637
KOG1795
KOG1980
KOG2446
KOG2531
KOG2781
KOG2908
KOG3048
KOG3222
KOG3239
KOG3285

# Category: Partial 
KOG0188
KOG0346
KOG0376
KOG0927
KOG1159
KOG1374
KOG1532
KOG1534
KOG1637
KOG2446
KOG2531