WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      197       79.44      -   246     1.25     19.80

   Group 1       53       80.30      -    64     1.21     16.98
   Group 2       45       80.36      -    60     1.33     24.44
   Group 3       46       75.41      -    54     1.17     15.22
   Group 4       53       81.54      -    68     1.28     22.64

   Partial      233       93.95      -   362     1.55     39.06

   Group 1       61       92.42      -    92     1.51     34.43
   Group 2       55       98.21      -    82     1.49     40.00
   Group 3       55       90.16      -    85     1.55     38.18
   Group 4       62       95.38      -   103     1.66     43.55

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0174
KOG0184
KOG0209
KOG0233
KOG0261
KOG0271
KOG0285
KOG0291
KOG0292
KOG0302
KOG0364
KOG0376
KOG0469
KOG0556
KOG0563
KOG0567
KOG0729
KOG0894
KOG1137
KOG1185
KOG1241
KOG1272
KOG1349
KOG1358
KOG1374
KOG1394
KOG1596
KOG1723
KOG1770
KOG1795
KOG1872
KOG2303
KOG2451
KOG2519
KOG2529
KOG2531
KOG2535
KOG2537
KOG2707
KOG2784
KOG2908
KOG2916
KOG2930
KOG2948
KOG3147
KOG3349
KOG3405
KOG3479
KOG3497
KOG3499
KOG3855

# Category: Partial 
KOG0174
KOG0285
KOG0291
KOG0302
KOG0364
KOG0469
KOG0729
KOG1374
KOG2303
KOG2531
KOG2537
KOG2908
KOG2916
KOG3349
KOG3405